initialise_max_bin_kmers.cpp File Reference
Implements raptor::hibf::initialise_max_bin_kmers. More...
#include <lemon/list_graph.h>#include <raptor/build/hibf/compute_kmers.hpp>#include <raptor/build/hibf/hierarchical_build.hpp>#include <raptor/build/hibf/initialise_max_bin_kmers.hpp>#include <raptor/build/hibf/update_user_bins.hpp>
Include dependency graph for initialise_max_bin_kmers.cpp:Namespaces | |
| namespace | raptor::hibf |
| Must be first include. | |
Functions | |
| template<seqan3::data_layout data_layout_mode> | |
| size_t | raptor::hibf::initialise_max_bin_kmers (robin_hood::unordered_flat_set< size_t > &kmers, std::vector< int64_t > &ibf_positions, std::vector< int64_t > &filename_indices, lemon::ListDigraph::Node const &node, build_data< data_layout_mode > &data, build_arguments const &arguments) |
| template size_t | raptor::hibf::initialise_max_bin_kmers< seqan3::data_layout::compressed > (robin_hood::unordered_flat_set< size_t > &, std::vector< int64_t > &, std::vector< int64_t > &, lemon::ListDigraph::Node const &, build_data< seqan3::data_layout::compressed > &, build_arguments const &) |
| template size_t | raptor::hibf::initialise_max_bin_kmers< seqan3::data_layout::uncompressed > (robin_hood::unordered_flat_set< size_t > &, std::vector< int64_t > &, std::vector< int64_t > &, lemon::ListDigraph::Node const &, build_data< seqan3::data_layout::uncompressed > &, build_arguments const &) |
Detailed Description
Implements raptor::hibf::initialise_max_bin_kmers.
